Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC17.23■□□□□ 0.35
Usp54Q8BL06 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Gm7504-201ENSMUST00000201449 424 ntBASIC17.23■□□□□ 0.35
Usp54Q8BL06 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Gm23105-201ENSMUST00000083719 134 ntBASIC17.23■□□□□ 0.35
Usp54Q8BL06 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Usp54Q8BL06 Gm44152-201ENSMUST00000205007 1691 ntBASIC17.22■□□□□ 0.35
Usp54Q8BL06 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Usp54Q8BL06 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Gm12816-201ENSMUST00000118069 1212 ntBASIC17.22■□□□□ 0.35
Usp54Q8BL06 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Usp54Q8BL06 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC17.22■□□□□ 0.35
Usp54Q8BL06 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Gm9796-201ENSMUST00000062249 2250 ntBASIC17.22■□□□□ 0.35
Usp54Q8BL06 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Usp54Q8BL06 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Gm37437-201ENSMUST00000194451 1937 ntBASIC17.22■□□□□ 0.35
Usp54Q8BL06 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp54Q8BL06 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Usp54Q8BL06 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp54Q8BL06 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp54Q8BL06 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Usp54Q8BL06 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp54Q8BL06 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp54Q8BL06 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Usp54Q8BL06 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp54Q8BL06 Gm25063-201ENSMUST00000104666 94 ntBASIC17.21■□□□□ 0.35
Usp54Q8BL06 Gm11244-201ENSMUST00000121243 237 ntBASIC17.21■□□□□ 0.35
Usp54Q8BL06 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp54Q8BL06 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp54Q8BL06 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC17.21■□□□□ 0.35
Usp54Q8BL06 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp54Q8BL06 Gm4978-201ENSMUST00000071565 801 ntBASIC17.21■□□□□ 0.35
Usp54Q8BL06 Gm23680-201ENSMUST00000083162 164 ntBASIC17.21■□□□□ 0.35
Usp54Q8BL06 Gm5780-201ENSMUST00000217774 1834 ntBASIC17.21■□□□□ 0.35
Usp54Q8BL06 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Usp54Q8BL06 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp54Q8BL06 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp54Q8BL06 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Usp54Q8BL06 Gm21358-201ENSMUST00000191645 1659 ntBASIC17.2■□□□□ 0.34
Usp54Q8BL06 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Gm11801-201ENSMUST00000117807 746 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms