Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SynbQ8BI41 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SynbQ8BI41 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SynbQ8BI41 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.86□□□□□ -0.51
SynbQ8BI41 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SynbQ8BI41 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.85□□□□□ -0.51
SynbQ8BI41 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SynbQ8BI41 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.85□□□□□ -0.51
SynbQ8BI41 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.85□□□□□ -0.51
SynbQ8BI41 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.85□□□□□ -0.51
SynbQ8BI41 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SynbQ8BI41 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.85□□□□□ -0.51
SynbQ8BI41 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.85□□□□□ -0.51
SynbQ8BI41 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.85□□□□□ -0.51
SynbQ8BI41 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.85□□□□□ -0.51
SynbQ8BI41 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.85□□□□□ -0.51
SynbQ8BI41 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SynbQ8BI41 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SynbQ8BI41 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.84□□□□□ -0.51
SynbQ8BI41 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.84□□□□□ -0.51
SynbQ8BI41 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
SynbQ8BI41 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.84□□□□□ -0.51
SynbQ8BI41 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.84□□□□□ -0.51
SynbQ8BI41 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Gm14109-201ENSMUST00000118814 309 ntBASIC11.84□□□□□ -0.51
SynbQ8BI41 Gm14704-201ENSMUST00000120300 874 ntBASIC11.84□□□□□ -0.51
SynbQ8BI41 Gm12176-201ENSMUST00000121420 875 ntBASIC11.84□□□□□ -0.51
SynbQ8BI41 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 B9d1os-201ENSMUST00000137010 674 ntBASIC11.84□□□□□ -0.51
SynbQ8BI41 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
SynbQ8BI41 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.84□□□□□ -0.51
SynbQ8BI41 Gm3096-201ENSMUST00000185770 364 ntBASIC11.84□□□□□ -0.51
SynbQ8BI41 Gm8885-201ENSMUST00000189382 598 ntBASIC11.84□□□□□ -0.51
SynbQ8BI41 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.84□□□□□ -0.51
SynbQ8BI41 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SynbQ8BI41 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SynbQ8BI41 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SynbQ8BI41 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.84□□□□□ -0.51
SynbQ8BI41 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.84□□□□□ -0.51
SynbQ8BI41 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SynbQ8BI41 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SynbQ8BI41 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.84□□□□□ -0.51
SynbQ8BI41 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SynbQ8BI41 Map1b-203ENSMUST00000223725 2669 ntBASIC11.83□□□□□ -0.51
SynbQ8BI41 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.83□□□□□ -0.51
SynbQ8BI41 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
SynbQ8BI41 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.83□□□□□ -0.51
SynbQ8BI41 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
SynbQ8BI41 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SynbQ8BI41 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms