Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Gm24548-201ENSMUST00000158650 108 ntBASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn3Q8BHH8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 AY702102-202ENSMUST00000194651 1173 ntBASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.65□□□□□ -0.54
Clrn3Q8BHH8 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Clrn3Q8BHH8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Clrn3Q8BHH8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Clrn3Q8BHH8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Clrn3Q8BHH8 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Clrn3Q8BHH8 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.65□□□□□ -0.55
Clrn3Q8BHH8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Clrn3Q8BHH8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn3Q8BHH8 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn3Q8BHH8 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn3Q8BHH8 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn3Q8BHH8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn3Q8BHH8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Clrn3Q8BHH8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn3Q8BHH8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn3Q8BHH8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn3Q8BHH8 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn3Q8BHH8 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms