Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Gm16479-201ENSMUST00000121706 932 ntBASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Gm17208-201ENSMUST00000168388 535 ntBASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Gm22121-201ENSMUST00000175148 54 ntBASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.12□□□□□ -0.31
Trim6Q8BGE7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim6Q8BGE7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm8213-201ENSMUST00000118191 441 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm11637-201ENSMUST00000120601 592 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm14760-201ENSMUST00000121831 999 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm27437-201ENSMUST00000183429 107 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm28911-201ENSMUST00000188837 117 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm8598-201ENSMUST00000221184 836 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm2423-201ENSMUST00000074863 733 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim6Q8BGE7 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim6Q8BGE7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim6Q8BGE7 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim6Q8BGE7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim6Q8BGE7 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim6Q8BGE7 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms