Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.25□□□□□ -0.45
Ubp1Q811S7 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Gm12058-201ENSMUST00000118614 437 ntBASIC12.24□□□□□ -0.45
Ubp1Q811S7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.24□□□□□ -0.45
Ubp1Q811S7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Gm37201-201ENSMUST00000191845 523 ntBASIC12.24□□□□□ -0.45
Ubp1Q811S7 Gm6621-201ENSMUST00000193251 772 ntBASIC12.24□□□□□ -0.45
Ubp1Q811S7 Gm38266-201ENSMUST00000194931 421 ntBASIC12.24□□□□□ -0.45
Ubp1Q811S7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.24□□□□□ -0.45
Ubp1Q811S7 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC12.24□□□□□ -0.45
Ubp1Q811S7 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.24□□□□□ -0.45
Ubp1Q811S7 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.24□□□□□ -0.45
Ubp1Q811S7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.24□□□□□ -0.45
Ubp1Q811S7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.24□□□□□ -0.45
Ubp1Q811S7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.24□□□□□ -0.45
Ubp1Q811S7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.24□□□□□ -0.45
Ubp1Q811S7 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.24□□□□□ -0.45
Ubp1Q811S7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Ubp1Q811S7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ubp1Q811S7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.23□□□□□ -0.45
Ubp1Q811S7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.23□□□□□ -0.45
Ubp1Q811S7 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Gm13342-201ENSMUST00000121055 207 ntBASIC12.23□□□□□ -0.45
Ubp1Q811S7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Gm25025-201ENSMUST00000175018 111 ntBASIC12.23□□□□□ -0.45
Ubp1Q811S7 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Gm43179-201ENSMUST00000198797 275 ntBASIC12.23□□□□□ -0.45
Ubp1Q811S7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Cts7-204ENSMUST00000225321 1257 ntBASIC12.23□□□□□ -0.45
Ubp1Q811S7 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.23□□□□□ -0.45
Ubp1Q811S7 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.23□□□□□ -0.45
Ubp1Q811S7 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms