Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Gm11425-201ENSMUST00000119608 498 ntBASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Gm13875-201ENSMUST00000120162 282 ntBASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Gm16379-201ENSMUST00000161469 348 ntBASIC12.12□□□□□ -0.47
Ccdc116Q80X53 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Gm8762-201ENSMUST00000193486 339 ntBASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Gm9396-201ENSMUST00000076703 567 ntBASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc116Q80X53 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc116Q80X53 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc116Q80X53 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc116Q80X53 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.1□□□□□ -0.47
Ccdc116Q80X53 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc116Q80X53 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc116Q80X53 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms