Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vrk1Q80X41 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.82□□□□□ -0.52
Vrk1Q80X41 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.82□□□□□ -0.52
Vrk1Q80X41 AU022133-201ENSMUST00000200601 873 ntBASIC11.82□□□□□ -0.52
Vrk1Q80X41 Gm44100-201ENSMUST00000204329 436 ntBASIC11.82□□□□□ -0.52
Vrk1Q80X41 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.82□□□□□ -0.52
Vrk1Q80X41 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vrk1Q80X41 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.81□□□□□ -0.52
Vrk1Q80X41 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Vrk1Q80X41 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.81□□□□□ -0.52
Vrk1Q80X41 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.81□□□□□ -0.52
Vrk1Q80X41 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.81□□□□□ -0.52
Vrk1Q80X41 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.81□□□□□ -0.52
Vrk1Q80X41 AY036118-201ENSMUST00000200021 923 ntBASIC11.81□□□□□ -0.52
Vrk1Q80X41 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.81□□□□□ -0.52
Vrk1Q80X41 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Vrk1Q80X41 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.8□□□□□ -0.52
Vrk1Q80X41 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.8□□□□□ -0.52
Vrk1Q80X41 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms