Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpp38Q80UU2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpp38Q80UU2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rpp38Q80UU2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpp38Q80UU2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpp38Q80UU2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpp38Q80UU2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpp38Q80UU2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpp38Q80UU2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpp38Q80UU2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rpp38Q80UU2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Rprl1-201ENSMUST00000158050 327 ntBASIC12.33□□□□□ -0.44
Rpp38Q80UU2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.33□□□□□ -0.44
Rpp38Q80UU2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpp38Q80UU2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Gm14644-201ENSMUST00000116671 647 ntBASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Gm12015-201ENSMUST00000117065 843 ntBASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Gm15547-201ENSMUST00000122152 333 ntBASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Gm35960-201ENSMUST00000202712 767 ntBASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Gm6334-201ENSMUST00000207083 228 ntBASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Cts7-204ENSMUST00000225321 1257 ntBASIC12.32□□□□□ -0.44
Rpp38Q80UU2 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpp38Q80UU2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms