Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gm6447-201ENSMUST00000118905 835 ntBASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gm18730-201ENSMUST00000218038 343 ntBASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Prpf38bQ80SY5 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Prpf38bQ80SY5 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Gm25700-201ENSMUST00000177693 110 ntBASIC13□□□□□ -0.33
Prpf38bQ80SY5 Gm2546-201ENSMUST00000182630 991 ntBASIC13□□□□□ -0.33
Prpf38bQ80SY5 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13□□□□□ -0.33
Prpf38bQ80SY5 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Gm44651-201ENSMUST00000207343 372 ntBASIC13□□□□□ -0.33
Prpf38bQ80SY5 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms