Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pif1Q80SX8 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Gm6963-201ENSMUST00000147879 379 ntBASIC11.51□□□□□ -0.57
Pif1Q80SX8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.51□□□□□ -0.57
Pif1Q80SX8 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.51□□□□□ -0.57
Pif1Q80SX8 AC132260.2-201ENSMUST00000224482 344 ntBASIC11.51□□□□□ -0.57
Pif1Q80SX8 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.51□□□□□ -0.57
Pif1Q80SX8 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.51□□□□□ -0.57
Pif1Q80SX8 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pif1Q80SX8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.5□□□□□ -0.57
Pif1Q80SX8 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Gm14832-201ENSMUST00000121289 322 ntBASIC11.5□□□□□ -0.57
Pif1Q80SX8 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Gm24749-201ENSMUST00000157838 343 ntBASIC11.5□□□□□ -0.57
Pif1Q80SX8 Gm24845-201ENSMUST00000158034 109 ntBASIC11.5□□□□□ -0.57
Pif1Q80SX8 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Gm28882-201ENSMUST00000185504 314 ntBASIC11.5□□□□□ -0.57
Pif1Q80SX8 Gm28941-201ENSMUST00000185536 1017 ntBASIC11.5□□□□□ -0.57
Pif1Q80SX8 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Gm32999-201ENSMUST00000192693 562 ntBASIC11.5□□□□□ -0.57
Pif1Q80SX8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.5□□□□□ -0.57
Pif1Q80SX8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Gm7340-201ENSMUST00000119729 2752 ntBASIC11.5□□□□□ -0.57
Pif1Q80SX8 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Cir1-201ENSMUST00000058615 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pif1Q80SX8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Pif1Q80SX8 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.49□□□□□ -0.57
Pif1Q80SX8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.49□□□□□ -0.57
Pif1Q80SX8 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms