Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm37448-201ENSMUST00000192795 697 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Gm24749-201ENSMUST00000157838 343 ntBASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Gm27627-201ENSMUST00000183644 150 ntBASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 AY036118-201ENSMUST00000200021 923 ntBASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubfd1Q78JW9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Mir3102-201ENSMUST00000175555 104 ntBASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Gm9630-201ENSMUST00000178304 885 ntBASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Gm18730-201ENSMUST00000218038 343 ntBASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubfd1Q78JW9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms