Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Gm7488-201ENSMUST00000117148 684 ntBASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Gm11597-201ENSMUST00000121423 964 ntBASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Gm19163-201ENSMUST00000223313 780 ntBASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scaf4Q6PFF0 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Gm23119-201ENSMUST00000158610 140 ntBASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms