Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Gm8227-201ENSMUST00000223306 571 ntBASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Morn2-202ENSMUST00000227729 656 ntBASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Gm12058-201ENSMUST00000118614 437 ntBASIC12.53□□□□□ -0.4
Casc4Q6P2L7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Gm27023-201ENSMUST00000182372 285 ntBASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Gm43179-201ENSMUST00000198797 275 ntBASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Casc4Q6P2L7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Casc4Q6P2L7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Casc4Q6P2L7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Casc4Q6P2L7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.52□□□□□ -0.4
Casc4Q6P2L7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Casc4Q6P2L7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.52□□□□□ -0.4
Casc4Q6P2L7 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Casc4Q6P2L7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Casc4Q6P2L7 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Casc4Q6P2L7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.52□□□□□ -0.41
Casc4Q6P2L7 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Casc4Q6P2L7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Casc4Q6P2L7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Casc4Q6P2L7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.52□□□□□ -0.41
Casc4Q6P2L7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms