Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Gm37795-201ENSMUST00000194216 2459 ntBASIC9.38□□□□□ -0.91
NipblQ6KCD5 Gm23062-201ENSMUST00000102349 110 ntBASIC9.38□□□□□ -0.91
NipblQ6KCD5 Gm12736-201ENSMUST00000119330 236 ntBASIC9.38□□□□□ -0.91
NipblQ6KCD5 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Gm24934-201ENSMUST00000103764 111 ntBASIC9.38□□□□□ -0.91
NipblQ6KCD5 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Defa-ps16-201ENSMUST00000121939 171 ntBASIC9.38□□□□□ -0.91
NipblQ6KCD5 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Gm23119-201ENSMUST00000158610 140 ntBASIC9.38□□□□□ -0.91
NipblQ6KCD5 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.38□□□□□ -0.91
NipblQ6KCD5 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.38□□□□□ -0.91
NipblQ6KCD5 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC9.38□□□□□ -0.91
NipblQ6KCD5 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.38□□□□□ -0.91
NipblQ6KCD5 Gm4930-201ENSMUST00000219926 1087 ntBASIC9.38□□□□□ -0.91
NipblQ6KCD5 Gm19009-201ENSMUST00000223072 823 ntBASIC9.38□□□□□ -0.91
NipblQ6KCD5 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.38□□□□□ -0.91
NipblQ6KCD5 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
NipblQ6KCD5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm12857-201ENSMUST00000117678 592 ntBASIC9.37□□□□□ -0.91
NipblQ6KCD5 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
NipblQ6KCD5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm17877-201ENSMUST00000192578 814 ntBASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm44980-201ENSMUST00000205826 314 ntBASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm17798-201ENSMUST00000182282 1035 ntBASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm9081-201ENSMUST00000182346 991 ntBASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm9022-201ENSMUST00000182482 992 ntBASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm4654-201ENSMUST00000183305 982 ntBASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.37□□□□□ -0.91
NipblQ6KCD5 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NipblQ6KCD5 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms