Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm12591-201ENSMUST00000122407 1177 ntBASIC9.38□□□□□ -0.91
Foxc1Q61572 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm4207-201ENSMUST00000173144 960 ntBASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm22693-201ENSMUST00000175049 442 ntBASIC9.38□□□□□ -0.91
Foxc1Q61572 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm28941-201ENSMUST00000185536 1017 ntBASIC9.38□□□□□ -0.91
Foxc1Q61572 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm42430-201ENSMUST00000197209 616 ntBASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC9.38□□□□□ -0.91
Foxc1Q61572 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC9.38□□□□□ -0.91
Foxc1Q61572 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 AC122305.4-201ENSMUST00000216159 1206 ntBASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm2824-203ENSMUST00000226189 1228 ntBASIC9.38□□□□□ -0.91
Foxc1Q61572 AC158981.3-201ENSMUST00000226844 1024 ntBASIC9.38□□□□□ -0.91
Foxc1Q61572 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Foxc1Q61572 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm37082-201ENSMUST00000192629 1927 ntBASIC9.38□□□□□ -0.91
Foxc1Q61572 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.38□□□□□ -0.91
Foxc1Q61572 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Foxc1Q61572 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm18222-201ENSMUST00000202416 1387 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 AC139054.1-201ENSMUST00000226898 1598 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm11661-201ENSMUST00000121761 1327 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm24590-201ENSMUST00000116699 119 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm13744-201ENSMUST00000118953 850 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm12384-201ENSMUST00000119228 919 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm15741-201ENSMUST00000119401 754 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm11637-201ENSMUST00000120601 592 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm15595-201ENSMUST00000120840 961 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm14908-201ENSMUST00000120930 1286 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9.37□□□□□ -0.91
Foxc1Q61572 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Foxc1Q61572 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm20852-202ENSMUST00000188011 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm42783-201ENSMUST00000197075 795 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Gm19931-201ENSMUST00000198920 368 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 AC154515.3-201ENSMUST00000225081 1159 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Zfp850-201ENSMUST00000099111 941 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms