Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Sox17Q61473 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sox17Q61473 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sox17Q61473 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.55□□□□□ -0.56
Sox17Q61473 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.55□□□□□ -0.56
Sox17Q61473 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox17Q61473 Gm16479-201ENSMUST00000121706 932 ntBASIC11.55□□□□□ -0.56
Sox17Q61473 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.55□□□□□ -0.56
Sox17Q61473 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.55□□□□□ -0.56
Sox17Q61473 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.55□□□□□ -0.56
Sox17Q61473 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Gm17208-201ENSMUST00000168388 535 ntBASIC11.55□□□□□ -0.56
Sox17Q61473 Gm8598-201ENSMUST00000221184 836 ntBASIC11.55□□□□□ -0.56
Sox17Q61473 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.55□□□□□ -0.56
Sox17Q61473 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.55□□□□□ -0.56
Sox17Q61473 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.55□□□□□ -0.56
Sox17Q61473 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Sox17Q61473 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox17Q61473 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sox17Q61473 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.54□□□□□ -0.56
Sox17Q61473 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Sox17Q61473 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sox17Q61473 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox17Q61473 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.54□□□□□ -0.56
Sox17Q61473 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Sox17Q61473 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.54□□□□□ -0.56
Sox17Q61473 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox17Q61473 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox17Q61473 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox17Q61473 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox17Q61473 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.54□□□□□ -0.56
Sox17Q61473 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.54□□□□□ -0.56
Sox17Q61473 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.54□□□□□ -0.56
Sox17Q61473 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.54□□□□□ -0.56
Sox17Q61473 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.54□□□□□ -0.56
Sox17Q61473 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Sox17Q61473 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sox17Q61473 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.54□□□□□ -0.56
Sox17Q61473 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox17Q61473 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sox17Q61473 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox17Q61473 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox17Q61473 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox17Q61473 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.53□□□□□ -0.56
Sox17Q61473 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.53□□□□□ -0.56
Sox17Q61473 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Gm2495-201ENSMUST00000191160 466 ntBASIC11.53□□□□□ -0.56
Sox17Q61473 Gm37935-201ENSMUST00000192012 982 ntBASIC11.53□□□□□ -0.56
Sox17Q61473 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox17Q61473 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox17Q61473 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sox17Q61473 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms