Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm29763-201ENSMUST00000205306 616 ntBASIC13.54□□□□□ -0.24
Col11a1Q61245 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.54□□□□□ -0.24
Col11a1Q61245 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.54□□□□□ -0.24
Col11a1Q61245 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.54□□□□□ -0.24
Col11a1Q61245 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.54□□□□□ -0.24
Col11a1Q61245 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.54□□□□□ -0.24
Col11a1Q61245 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col11a1Q61245 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.54□□□□□ -0.24
Col11a1Q61245 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm24248-201ENSMUST00000157321 322 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm43380-201ENSMUST00000200421 220 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm7082-201ENSMUST00000209880 969 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm7940-201ENSMUST00000218195 769 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col11a1Q61245 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col11a1Q61245 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Matn2-206ENSMUST00000228570 2798 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm5555-201ENSMUST00000120352 1111 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm9135-201ENSMUST00000182963 990 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.53□□□□□ -0.24
Col11a1Q61245 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Col11a1Q61245 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.53□□□□□ -0.24
Col11a1Q61245 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.53□□□□□ -0.24
Col11a1Q61245 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.53□□□□□ -0.24
Col11a1Q61245 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Col11a1Q61245 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.53□□□□□ -0.24
Col11a1Q61245 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col11a1Q61245 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col11a1Q61245 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col11a1Q61245 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col11a1Q61245 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Col11a1Q61245 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col11a1Q61245 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col11a1Q61245 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Col11a1Q61245 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Col11a1Q61245 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col11a1Q61245 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col11a1Q61245 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col11a1Q61245 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col11a1Q61245 Gm12453-201ENSMUST00000121981 331 ntBASIC13.52□□□□□ -0.25
Col11a1Q61245 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.52□□□□□ -0.25
Col11a1Q61245 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.52□□□□□ -0.25
Col11a1Q61245 Gm7719-201ENSMUST00000182374 975 ntBASIC13.52□□□□□ -0.25
Col11a1Q61245 Gm37826-201ENSMUST00000195329 322 ntBASIC13.52□□□□□ -0.25
Col11a1Q61245 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.52□□□□□ -0.25
Col11a1Q61245 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC13.52□□□□□ -0.25
Col11a1Q61245 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.52□□□□□ -0.25
Col11a1Q61245 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col11a1Q61245 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col11a1Q61245 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col11a1Q61245 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col11a1Q61245 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col11a1Q61245 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col11a1Q61245 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.52□□□□□ -0.25
Col11a1Q61245 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Col11a1Q61245 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC13.51□□□□□ -0.25
Col11a1Q61245 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col11a1Q61245 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col11a1Q61245 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms