Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.88□□□□□ -0.51
ClpbQ60649 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.88□□□□□ -0.51
ClpbQ60649 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
ClpbQ60649 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
ClpbQ60649 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.88□□□□□ -0.51
ClpbQ60649 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.88□□□□□ -0.51
ClpbQ60649 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
ClpbQ60649 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ClpbQ60649 Daam2-202ENSMUST00000224595 1926 ntBASIC11.88□□□□□ -0.51
ClpbQ60649 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.87□□□□□ -0.51
ClpbQ60649 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
ClpbQ60649 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.87□□□□□ -0.51
ClpbQ60649 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.87□□□□□ -0.51
ClpbQ60649 Gm14760-201ENSMUST00000121831 999 ntBASIC11.87□□□□□ -0.51
ClpbQ60649 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.87□□□□□ -0.51
ClpbQ60649 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.87□□□□□ -0.51
ClpbQ60649 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.87□□□□□ -0.51
ClpbQ60649 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.87□□□□□ -0.51
ClpbQ60649 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Gm22058-201ENSMUST00000083393 310 ntBASIC11.87□□□□□ -0.51
ClpbQ60649 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
ClpbQ60649 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
ClpbQ60649 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
ClpbQ60649 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
ClpbQ60649 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClpbQ60649 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
ClpbQ60649 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
ClpbQ60649 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.86□□□□□ -0.51
ClpbQ60649 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.86□□□□□ -0.51
ClpbQ60649 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
ClpbQ60649 Gm11222-201ENSMUST00000119005 738 ntBASIC11.86□□□□□ -0.51
ClpbQ60649 Gm14381-201ENSMUST00000122105 414 ntBASIC11.86□□□□□ -0.51
ClpbQ60649 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.86□□□□□ -0.51
ClpbQ60649 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.86□□□□□ -0.51
ClpbQ60649 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
ClpbQ60649 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
ClpbQ60649 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Gm6621-201ENSMUST00000193251 772 ntBASIC11.86□□□□□ -0.51
ClpbQ60649 Gm38092-201ENSMUST00000195600 653 ntBASIC11.86□□□□□ -0.51
ClpbQ60649 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.86□□□□□ -0.51
ClpbQ60649 Gm45865-201ENSMUST00000211815 945 ntBASIC11.86□□□□□ -0.51
ClpbQ60649 Gm9257-201ENSMUST00000221254 232 ntBASIC11.86□□□□□ -0.51
ClpbQ60649 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ClpbQ60649 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
ClpbQ60649 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.86□□□□□ -0.51
ClpbQ60649 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.86□□□□□ -0.51
ClpbQ60649 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
ClpbQ60649 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms