Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Gm5340-201ENSMUST00000203733 880 ntBASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Gm45398-201ENSMUST00000210561 165 ntBASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Gm18041-201ENSMUST00000218210 618 ntBASIC21.46■■□□□ 1.03
Trim41Q5NCC3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Gm7278-201ENSMUST00000119836 1401 ntBASIC21.46■■□□□ 1.03
Trim41Q5NCC3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim41Q5NCC3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Gm43721-201ENSMUST00000199677 2313 ntBASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Gm13263-201ENSMUST00000121271 838 ntBASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Gm43962-201ENSMUST00000203898 190 ntBASIC21.45■■□□□ 1.02
Trim41Q5NCC3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Gm26035-201ENSMUST00000083065 308 ntBASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Trim41Q5NCC3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Gm38094-201ENSMUST00000195864 2978 ntBASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Gm13668-201ENSMUST00000119237 1001 ntBASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC21.44■■□□□ 1.02
Trim41Q5NCC3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Gm18038-201ENSMUST00000197900 485 ntBASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 AC159246.1-201ENSMUST00000214478 249 ntBASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Snora73b-201ENSMUST00000083419 205 ntBASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Gm42863-201ENSMUST00000197875 2958 ntBASIC21.44■■□□□ 1.02
Trim41Q5NCC3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim41Q5NCC3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Gm5298-201ENSMUST00000201122 892 ntBASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Gm270-201ENSMUST00000223010 976 ntBASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Gm18227-201ENSMUST00000211082 1468 ntBASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms