Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spire1Q52KF3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Spire1Q52KF3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spire1Q52KF3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.6□□□□□ -0.39
Spire1Q52KF3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spire1Q52KF3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Gm24891-201ENSMUST00000104391 136 ntBASIC12.59□□□□□ -0.39
Spire1Q52KF3 Gm14724-201ENSMUST00000118400 537 ntBASIC12.59□□□□□ -0.39
Spire1Q52KF3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.59□□□□□ -0.39
Spire1Q52KF3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.59□□□□□ -0.39
Spire1Q52KF3 Gm4607-201ENSMUST00000206649 577 ntBASIC12.59□□□□□ -0.39
Spire1Q52KF3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.59□□□□□ -0.39
Spire1Q52KF3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spire1Q52KF3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.58□□□□□ -0.39
Spire1Q52KF3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Spire1Q52KF3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Spire1Q52KF3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.58□□□□□ -0.4
Spire1Q52KF3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Gm5733-201ENSMUST00000190232 939 ntBASIC12.58□□□□□ -0.4
Spire1Q52KF3 Gm2965-201ENSMUST00000198365 343 ntBASIC12.58□□□□□ -0.4
Spire1Q52KF3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Gm6905-201ENSMUST00000205729 511 ntBASIC12.58□□□□□ -0.4
Spire1Q52KF3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Spire1Q52KF3 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.58□□□□□ -0.4
Spire1Q52KF3 Gm1821-202ENSMUST00000227415 750 ntBASIC12.58□□□□□ -0.4
Spire1Q52KF3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Spire1Q52KF3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.57□□□□□ -0.4
Spire1Q52KF3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Gm12857-201ENSMUST00000117678 592 ntBASIC12.57□□□□□ -0.4
Spire1Q52KF3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.57□□□□□ -0.4
Spire1Q52KF3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Gm7722-201ENSMUST00000120646 741 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms