Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rc3h1Q4VGL6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm15711-201ENSMUST00000118889 535 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm29615-201ENSMUST00000185371 697 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm28224-201ENSMUST00000186078 697 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm29001-201ENSMUST00000186177 697 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm28292-201ENSMUST00000186593 697 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm28101-201ENSMUST00000187608 697 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm29076-201ENSMUST00000187689 697 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm28302-201ENSMUST00000187931 697 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm28646-201ENSMUST00000188220 697 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm28205-201ENSMUST00000189177 697 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm29032-201ENSMUST00000189797 697 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm28695-201ENSMUST00000190300 697 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm37448-201ENSMUST00000192795 697 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Rc3h1Q4VGL6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rc3h1Q4VGL6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rc3h1Q4VGL6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rc3h1Q4VGL6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rc3h1Q4VGL6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rc3h1Q4VGL6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rc3h1Q4VGL6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rc3h1Q4VGL6 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rc3h1Q4VGL6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rc3h1Q4VGL6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rc3h1Q4VGL6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rc3h1Q4VGL6 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rc3h1Q4VGL6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rc3h1Q4VGL6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rc3h1Q4VGL6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Gm23949-201ENSMUST00000104027 127 ntBASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Rprl1-201ENSMUST00000158050 327 ntBASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rc3h1Q4VGL6 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms