Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Gm14213-201ENSMUST00000119778 768 ntBASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Gm15610-201ENSMUST00000120584 195 ntBASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Gm7082-201ENSMUST00000209880 969 ntBASIC14.98□□□□□ -0.01
Shank3Q4ACU6 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.98□□□□□ -0.01
Shank3Q4ACU6 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Gm44056-201ENSMUST00000204623 1427 ntBASIC14.98□□□□□ -0.01
Shank3Q4ACU6 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank3Q4ACU6 Gm25053-201ENSMUST00000103982 133 ntBASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm25922-201ENSMUST00000104281 130 ntBASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.97□□□□□ -0.01
Shank3Q4ACU6 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm24679-201ENSMUST00000158762 111 ntBASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm25053-202ENSMUST00000199731 132 ntBASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm43852-201ENSMUST00000202098 917 ntBASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm8768-201ENSMUST00000220020 826 ntBASIC14.97□□□□□ -0.01
Shank3Q4ACU6 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm11619-201ENSMUST00000117474 237 ntBASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm5257-201ENSMUST00000121823 790 ntBASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm8197-202ENSMUST00000193422 934 ntBASIC14.97□□□□□ -0.01
Shank3Q4ACU6 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank3Q4ACU6 Gm18642-201ENSMUST00000206642 1400 ntBASIC14.97□□□□□ -0.01
Shank3Q4ACU6 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.96□□□□□ -0.01
Shank3Q4ACU6 CT010506.1-201ENSMUST00000223673 349 ntBASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank3Q4ACU6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Shank3Q4ACU6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Shank3Q4ACU6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shank3Q4ACU6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shank3Q4ACU6 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shank3Q4ACU6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms