Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim80Q3V061 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim80Q3V061 Gm12485-201ENSMUST00000119641 291 ntBASIC12.82□□□□□ -0.36
Trim80Q3V061 Gm15376-201ENSMUST00000122258 783 ntBASIC12.82□□□□□ -0.36
Trim80Q3V061 Gm24644-201ENSMUST00000157114 139 ntBASIC12.82□□□□□ -0.36
Trim80Q3V061 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim80Q3V061 Gm43179-201ENSMUST00000198797 275 ntBASIC12.82□□□□□ -0.36
Trim80Q3V061 Gm44124-201ENSMUST00000204159 472 ntBASIC12.82□□□□□ -0.36
Trim80Q3V061 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Gm5161-201ENSMUST00000075243 853 ntBASIC12.82□□□□□ -0.36
Trim80Q3V061 Gm24447-201ENSMUST00000083977 338 ntBASIC12.82□□□□□ -0.36
Trim80Q3V061 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.82□□□□□ -0.36
Trim80Q3V061 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Trim80Q3V061 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.81□□□□□ -0.36
Trim80Q3V061 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim80Q3V061 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim80Q3V061 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim80Q3V061 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim80Q3V061 Gm5370-201ENSMUST00000187187 574 ntBASIC12.81□□□□□ -0.36
Trim80Q3V061 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Gm43818-201ENSMUST00000200605 466 ntBASIC12.81□□□□□ -0.36
Trim80Q3V061 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim80Q3V061 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim80Q3V061 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim80Q3V061 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Trim80Q3V061 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim80Q3V061 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.81□□□□□ -0.36
Trim80Q3V061 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim80Q3V061 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim80Q3V061 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim80Q3V061 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim80Q3V061 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim80Q3V061 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trim80Q3V061 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim80Q3V061 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim80Q3V061 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim80Q3V061 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim80Q3V061 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Gm38144-201ENSMUST00000192790 465 ntBASIC12.8□□□□□ -0.36
Trim80Q3V061 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Gm18473-201ENSMUST00000220543 868 ntBASIC12.8□□□□□ -0.36
Trim80Q3V061 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.8□□□□□ -0.36
Trim80Q3V061 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim80Q3V061 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim80Q3V061 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms