Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Gm11354-201ENSMUST00000121974 422 ntBASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Gm4654-201ENSMUST00000183305 982 ntBASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Gm44958-201ENSMUST00000203734 736 ntBASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Gm44158-201ENSMUST00000203881 505 ntBASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.42□□□□□ -0.42
Fam196aQ3USH1 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Gm26286-201ENSMUST00000104166 134 ntBASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Gm12783-201ENSMUST00000121425 397 ntBASIC12.41□□□□□ -0.42
Fam196aQ3USH1 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Gm21092-201ENSMUST00000178995 955 ntBASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Gm8531-201ENSMUST00000188319 893 ntBASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Gm45575-201ENSMUST00000210283 548 ntBASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Gm4604-201ENSMUST00000025040 390 ntBASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fam196aQ3USH1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fam196aQ3USH1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Fam196aQ3USH1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fam196aQ3USH1 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fam196aQ3USH1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fam196aQ3USH1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fam196aQ3USH1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Fam196aQ3USH1 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fam196aQ3USH1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fam196aQ3USH1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fam196aQ3USH1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fam196aQ3USH1 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
Fam196aQ3USH1 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms