Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Gm5621-201ENSMUST00000187303 640 ntBASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Gm9645-201ENSMUST00000197131 792 ntBASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Gm42779-201ENSMUST00000198807 406 ntBASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Gm44506-201ENSMUST00000206278 965 ntBASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Gm8342-201ENSMUST00000209839 757 ntBASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Gm19009-201ENSMUST00000223072 823 ntBASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Arhgef40Q3UPH7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Gm15610-201ENSMUST00000120584 195 ntBASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Gm43692-201ENSMUST00000198236 1062 ntBASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Gm44421-201ENSMUST00000205064 1221 ntBASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Gm3619-201ENSMUST00000219947 775 ntBASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Gm8894-201ENSMUST00000074642 666 ntBASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Olfr584-201ENSMUST00000098210 964 ntBASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Arhgef40Q3UPH7 Gm7002-201ENSMUST00000221386 2165 ntBASIC17.83■□□□□ 0.44
Arhgef40Q3UPH7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Arhgef40Q3UPH7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC17.83■□□□□ 0.44
Arhgef40Q3UPH7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Arhgef40Q3UPH7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Arhgef40Q3UPH7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Arhgef40Q3UPH7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Arhgef40Q3UPH7 Gm18983-201ENSMUST00000222884 2729 ntBASIC17.83■□□□□ 0.44
Arhgef40Q3UPH7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Arhgef40Q3UPH7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Arhgef40Q3UPH7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Arhgef40Q3UPH7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Arhgef40Q3UPH7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Arhgef40Q3UPH7 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Gm22877-201ENSMUST00000175451 105 ntBASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Gm9136-201ENSMUST00000193368 454 ntBASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Gm7940-201ENSMUST00000218195 769 ntBASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Gm37644-201ENSMUST00000192190 2270 ntBASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Gm9796-201ENSMUST00000062249 2250 ntBASIC17.82■□□□□ 0.44
Arhgef40Q3UPH7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms