Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Gm13342-201ENSMUST00000121055 207 ntBASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Gm27514-201ENSMUST00000183692 110 ntBASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Gm18304-201ENSMUST00000189162 546 ntBASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Gm8227-201ENSMUST00000223306 571 ntBASIC11.63□□□□□ -0.55
Brf2Q3UAW9 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Gm10076-201ENSMUST00000073238 384 ntBASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Brf2Q3UAW9 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.62□□□□□ -0.55
Brf2Q3UAW9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Gm23119-201ENSMUST00000158610 140 ntBASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Gm37201-201ENSMUST00000191845 523 ntBASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Gm44958-201ENSMUST00000203734 736 ntBASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Brf2Q3UAW9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Matn2-203ENSMUST00000226766 3252 ntBASIC11.61□□□□□ -0.55
Brf2Q3UAW9 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.61□□□□□ -0.55
Brf2Q3UAW9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Mir1247-201ENSMUST00000116706 82 ntBASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms