Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC8.42□□□□□ -1.06
Cops9Q3U898 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC8.42□□□□□ -1.06
Cops9Q3U898 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC8.42□□□□□ -1.06
Cops9Q3U898 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC8.42□□□□□ -1.06
Cops9Q3U898 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC8.42□□□□□ -1.06
Cops9Q3U898 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Mir3113-201ENSMUST00000175478 76 ntBASIC8.42□□□□□ -1.06
Cops9Q3U898 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Gm10576-201ENSMUST00000191927 825 ntBASIC8.42□□□□□ -1.06
Cops9Q3U898 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Gm45683-201ENSMUST00000210825 1247 ntBASIC8.42□□□□□ -1.06
Cops9Q3U898 Gm46209-201ENSMUST00000217912 553 ntBASIC8.42□□□□□ -1.06
Cops9Q3U898 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Gm7537-201ENSMUST00000221660 1414 ntBASIC8.42□□□□□ -1.06
Cops9Q3U898 Retreg1-206ENSMUST00000228306 1430 ntBASIC8.42□□□□□ -1.06
Cops9Q3U898 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC8.42□□□□□ -1.06
Cops9Q3U898 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cops9Q3U898 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Cops9Q3U898 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Cops9Q3U898 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Gm43860-201ENSMUST00000201742 2705 ntBASIC8.41□□□□□ -1.06
Cops9Q3U898 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 AC169511.2-201ENSMUST00000226674 2063 ntBASIC8.41□□□□□ -1.06
Cops9Q3U898 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 AC123738.2-201ENSMUST00000223791 1899 ntBASIC8.41□□□□□ -1.06
Cops9Q3U898 Gm7642-201ENSMUST00000216345 1809 ntBASIC8.41□□□□□ -1.06
Cops9Q3U898 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC8.41□□□□□ -1.06
Cops9Q3U898 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
Cops9Q3U898 AC101945.2-201ENSMUST00000227886 1377 ntBASIC8.41□□□□□ -1.06
Cops9Q3U898 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC8.41□□□□□ -1.06
Cops9Q3U898 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Gm6447-201ENSMUST00000118905 835 ntBASIC8.41□□□□□ -1.06
Cops9Q3U898 Gm12384-201ENSMUST00000119228 919 ntBASIC8.41□□□□□ -1.06
Cops9Q3U898 Gm12428-201ENSMUST00000119844 727 ntBASIC8.41□□□□□ -1.06
Cops9Q3U898 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cops9Q3U898 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC8.41□□□□□ -1.06
Cops9Q3U898 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms