Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Gm17420-201ENSMUST00000164753 153 ntBASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Gm19994-201ENSMUST00000217086 586 ntBASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdnep1Q3TP92 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Mir8109-201ENSMUST00000184375 117 ntBASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdnep1Q3TP92 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.21□□□□□ -0.14
Ctdnep1Q3TP92 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ctdnep1Q3TP92 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ctdnep1Q3TP92 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ctdnep1Q3TP92 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Gm42693-201ENSMUST00000196779 631 ntBASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Gm35960-201ENSMUST00000202712 767 ntBASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Gm8712-201ENSMUST00000221090 701 ntBASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdnep1Q3TP92 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms