Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm43671-201ENSMUST00000200422 433 ntBASIC11.01□□□□□ -0.65
Chd8Q09XV5 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.01□□□□□ -0.65
Chd8Q09XV5 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Gm25830-201ENSMUST00000158923 132 ntBASIC11.01□□□□□ -0.65
Chd8Q09XV5 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 AC103672.1-201ENSMUST00000227502 365 ntBASIC11.01□□□□□ -0.65
Chd8Q09XV5 Gm8181-201ENSMUST00000062242 669 ntBASIC11.01□□□□□ -0.65
Chd8Q09XV5 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11□□□□□ -0.65
Chd8Q09XV5 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Gm9072-201ENSMUST00000218390 1514 ntBASIC11□□□□□ -0.65
Chd8Q09XV5 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC11□□□□□ -0.65
Chd8Q09XV5 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC11□□□□□ -0.65
Chd8Q09XV5 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Gm43106-201ENSMUST00000199485 637 ntBASIC11□□□□□ -0.65
Chd8Q09XV5 Gm43249-201ENSMUST00000200464 458 ntBASIC11□□□□□ -0.65
Chd8Q09XV5 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11□□□□□ -0.65
Chd8Q09XV5 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC11□□□□□ -0.65
Chd8Q09XV5 AC138604.1-201ENSMUST00000226969 739 ntBASIC11□□□□□ -0.65
Chd8Q09XV5 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Chd8Q09XV5 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Gm5855-201ENSMUST00000200240 1305 ntBASIC11□□□□□ -0.65
Chd8Q09XV5 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Gm44913-201ENSMUST00000208060 2990 ntBASIC11□□□□□ -0.65
Chd8Q09XV5 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Chd8Q09XV5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11□□□□□ -0.65
Chd8Q09XV5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Chd8Q09XV5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC11□□□□□ -0.65
Chd8Q09XV5 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC11□□□□□ -0.65
Chd8Q09XV5 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC11□□□□□ -0.65
Chd8Q09XV5 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11□□□□□ -0.65
Chd8Q09XV5 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC11□□□□□ -0.65
Chd8Q09XV5 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11□□□□□ -0.65
Chd8Q09XV5 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11□□□□□ -0.65
Chd8Q09XV5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 AC166361.2-201ENSMUST00000219269 1415 ntBASIC11□□□□□ -0.65
Chd8Q09XV5 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chd8Q09XV5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.99□□□□□ -0.65
Chd8Q09XV5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.99□□□□□ -0.65
Chd8Q09XV5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Gm16296-201ENSMUST00000159905 325 ntBASIC10.99□□□□□ -0.65
Chd8Q09XV5 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.99□□□□□ -0.65
Chd8Q09XV5 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chd8Q09XV5 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Chd8Q09XV5 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms