Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.86□□□□□ -0.51
Hoxc4Q08624 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Gm26448-201ENSMUST00000082446 203 ntBASIC11.86□□□□□ -0.51
Hoxc4Q08624 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hoxc4Q08624 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.86□□□□□ -0.51
Hoxc4Q08624 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.86□□□□□ -0.51
Hoxc4Q08624 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.86□□□□□ -0.51
Hoxc4Q08624 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hoxc4Q08624 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.85□□□□□ -0.51
Hoxc4Q08624 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.85□□□□□ -0.51
Hoxc4Q08624 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.85□□□□□ -0.51
Hoxc4Q08624 Mir6979-201ENSMUST00000183927 56 ntBASIC11.85□□□□□ -0.51
Hoxc4Q08624 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Gm8956-201ENSMUST00000203939 825 ntBASIC11.85□□□□□ -0.51
Hoxc4Q08624 Gm44124-201ENSMUST00000204159 472 ntBASIC11.85□□□□□ -0.51
Hoxc4Q08624 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.85□□□□□ -0.51
Hoxc4Q08624 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Hoxc4Q08624 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.85□□□□□ -0.51
Hoxc4Q08624 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.85□□□□□ -0.51
Hoxc4Q08624 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.85□□□□□ -0.51
Hoxc4Q08624 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxc4Q08624 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.85□□□□□ -0.51
Hoxc4Q08624 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Gm23596-201ENSMUST00000104304 132 ntBASIC11.84□□□□□ -0.51
Hoxc4Q08624 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.84□□□□□ -0.51
Hoxc4Q08624 Gm37986-201ENSMUST00000193285 383 ntBASIC11.84□□□□□ -0.51
Hoxc4Q08624 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Gm21811-201ENSMUST00000096485 930 ntBASIC11.84□□□□□ -0.51
Hoxc4Q08624 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms