Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Gm14660-201ENSMUST00000119809 575 ntBASIC12.43□□□□□ -0.42
Pfdn6Q03958 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Gm8738-201ENSMUST00000172606 329 ntBASIC12.43□□□□□ -0.42
Pfdn6Q03958 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Snora73a-201ENSMUST00000082453 205 ntBASIC12.43□□□□□ -0.42
Pfdn6Q03958 Gm22058-201ENSMUST00000083393 310 ntBASIC12.43□□□□□ -0.42
Pfdn6Q03958 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.43□□□□□ -0.42
Pfdn6Q03958 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Gm11591-201ENSMUST00000120063 702 ntBASIC12.42□□□□□ -0.42
Pfdn6Q03958 Gm11964-201ENSMUST00000120982 444 ntBASIC12.42□□□□□ -0.42
Pfdn6Q03958 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Gm27023-201ENSMUST00000182372 285 ntBASIC12.42□□□□□ -0.42
Pfdn6Q03958 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.42□□□□□ -0.42
Pfdn6Q03958 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.42□□□□□ -0.42
Pfdn6Q03958 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Daam2-202ENSMUST00000224595 1926 ntBASIC12.42□□□□□ -0.42
Pfdn6Q03958 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.42□□□□□ -0.42
Pfdn6Q03958 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn6Q03958 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.41□□□□□ -0.42
Pfdn6Q03958 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.41□□□□□ -0.42
Pfdn6Q03958 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Gm7809-201ENSMUST00000153199 742 ntBASIC12.41□□□□□ -0.42
Pfdn6Q03958 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms