Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Col8a1Q00780 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Col8a1Q00780 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.57□□□□□ -0.72
Col8a1Q00780 Gm12501-201ENSMUST00000119163 529 ntBASIC10.57□□□□□ -0.72
Col8a1Q00780 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC10.57□□□□□ -0.72
Col8a1Q00780 Gm12628-201ENSMUST00000122193 382 ntBASIC10.57□□□□□ -0.72
Col8a1Q00780 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.57□□□□□ -0.72
Col8a1Q00780 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.57□□□□□ -0.72
Col8a1Q00780 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Col8a1Q00780 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.57□□□□□ -0.72
Col8a1Q00780 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.57□□□□□ -0.72
Col8a1Q00780 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.57□□□□□ -0.72
Col8a1Q00780 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.57□□□□□ -0.72
Col8a1Q00780 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Col8a1Q00780 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.57□□□□□ -0.72
Col8a1Q00780 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.57□□□□□ -0.72
Col8a1Q00780 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Col8a1Q00780 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Col8a1Q00780 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.57□□□□□ -0.72
Col8a1Q00780 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Col8a1Q00780 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Col8a1Q00780 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Col8a1Q00780 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col8a1Q00780 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Col8a1Q00780 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Col8a1Q00780 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Gm11941-201ENSMUST00000119904 610 ntBASIC10.56□□□□□ -0.72
Col8a1Q00780 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.56□□□□□ -0.72
Col8a1Q00780 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
Col8a1Q00780 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.56□□□□□ -0.72
Col8a1Q00780 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.56□□□□□ -0.72
Col8a1Q00780 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Gm6771-201ENSMUST00000182716 1001 ntBASIC10.56□□□□□ -0.72
Col8a1Q00780 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.56□□□□□ -0.72
Col8a1Q00780 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Col8a1Q00780 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC10.56□□□□□ -0.72
Col8a1Q00780 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Gm3793-201ENSMUST00000204973 672 ntBASIC10.56□□□□□ -0.72
Col8a1Q00780 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.56□□□□□ -0.72
Col8a1Q00780 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.56□□□□□ -0.72
Col8a1Q00780 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.56□□□□□ -0.72
Col8a1Q00780 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.56□□□□□ -0.72
Col8a1Q00780 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.56□□□□□ -0.72
Col8a1Q00780 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Col8a1Q00780 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Col8a1Q00780 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.56□□□□□ -0.72
Col8a1Q00780 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.56□□□□□ -0.72
Col8a1Q00780 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.56□□□□□ -0.72
Col8a1Q00780 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.56□□□□□ -0.72
Col8a1Q00780 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.56□□□□□ -0.72
Col8a1Q00780 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.56□□□□□ -0.72
Col8a1Q00780 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.56□□□□□ -0.72
Col8a1Q00780 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a1Q00780 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms