Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GabpaQ00422 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.98□□□□□ -0.17
GabpaQ00422 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.98□□□□□ -0.17
GabpaQ00422 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.98□□□□□ -0.17
GabpaQ00422 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
GabpaQ00422 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
GabpaQ00422 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
GabpaQ00422 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Gm13035-201ENSMUST00000117496 342 ntBASIC13.98□□□□□ -0.17
GabpaQ00422 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.98□□□□□ -0.17
GabpaQ00422 Gm13045-201ENSMUST00000119019 712 ntBASIC13.98□□□□□ -0.17
GabpaQ00422 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.98□□□□□ -0.17
GabpaQ00422 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.98□□□□□ -0.17
GabpaQ00422 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.98□□□□□ -0.17
GabpaQ00422 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.98□□□□□ -0.17
GabpaQ00422 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.98□□□□□ -0.17
GabpaQ00422 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
GabpaQ00422 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Gm18711-201ENSMUST00000199341 750 ntBASIC13.98□□□□□ -0.17
GabpaQ00422 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GabpaQ00422 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.98□□□□□ -0.17
GabpaQ00422 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.98□□□□□ -0.17
GabpaQ00422 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.98□□□□□ -0.17
GabpaQ00422 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.98□□□□□ -0.17
GabpaQ00422 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
GabpaQ00422 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.98□□□□□ -0.17
GabpaQ00422 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GabpaQ00422 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.97□□□□□ -0.17
GabpaQ00422 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
GabpaQ00422 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Gm9062-201ENSMUST00000117712 727 ntBASIC13.97□□□□□ -0.17
GabpaQ00422 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.97□□□□□ -0.17
GabpaQ00422 Gm7722-201ENSMUST00000120646 741 ntBASIC13.97□□□□□ -0.17
GabpaQ00422 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.97□□□□□ -0.17
GabpaQ00422 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.97□□□□□ -0.17
GabpaQ00422 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.97□□□□□ -0.17
GabpaQ00422 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Gm4607-201ENSMUST00000206649 577 ntBASIC13.97□□□□□ -0.17
GabpaQ00422 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
GabpaQ00422 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
GabpaQ00422 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
GabpaQ00422 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.97□□□□□ -0.17
GabpaQ00422 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
GabpaQ00422 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GabpaQ00422 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.97□□□□□ -0.17
GabpaQ00422 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
GabpaQ00422 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
GabpaQ00422 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms