Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.63□□□□□ -0.23
Hmgb1P63158 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hmgb1P63158 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.63□□□□□ -0.23
Hmgb1P63158 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Hmgb1P63158 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.63□□□□□ -0.23
Hmgb1P63158 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.63□□□□□ -0.23
Hmgb1P63158 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hmgb1P63158 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hmgb1P63158 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.63□□□□□ -0.23
Hmgb1P63158 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.63□□□□□ -0.23
Hmgb1P63158 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.63□□□□□ -0.23
Hmgb1P63158 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.63□□□□□ -0.23
Hmgb1P63158 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.63□□□□□ -0.23
Hmgb1P63158 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hmgb1P63158 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Hmgb1P63158 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Hmgb1P63158 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Hmgb1P63158 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Hmgb1P63158 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.62□□□□□ -0.23
Hmgb1P63158 Gm13315-201ENSMUST00000120376 991 ntBASIC13.62□□□□□ -0.23
Hmgb1P63158 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.62□□□□□ -0.23
Hmgb1P63158 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.62□□□□□ -0.23
Hmgb1P63158 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hmgb1P63158 Gm45925-201ENSMUST00000218882 744 ntBASIC13.62□□□□□ -0.23
Hmgb1P63158 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hmgb1P63158 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
Hmgb1P63158 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.62□□□□□ -0.23
Hmgb1P63158 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.62□□□□□ -0.23
Hmgb1P63158 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.62□□□□□ -0.23
Hmgb1P63158 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgb1P63158 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Hmgb1P63158 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.61□□□□□ -0.23
Hmgb1P63158 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.61□□□□□ -0.23
Hmgb1P63158 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.61□□□□□ -0.23
Hmgb1P63158 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.61□□□□□ -0.23
Hmgb1P63158 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hmgb1P63158 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.61□□□□□ -0.23
Hmgb1P63158 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Gm18304-201ENSMUST00000189162 546 ntBASIC13.61□□□□□ -0.23
Hmgb1P63158 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Hmgb1P63158 Gm44405-201ENSMUST00000198952 126 ntBASIC13.61□□□□□ -0.23
Hmgb1P63158 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hmgb1P63158 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.61□□□□□ -0.23
Hmgb1P63158 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hmgb1P63158 Gm22058-201ENSMUST00000083393 310 ntBASIC13.61□□□□□ -0.23
Hmgb1P63158 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Hmgb1P63158 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.61□□□□□ -0.23
Hmgb1P63158 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.61□□□□□ -0.23
Hmgb1P63158 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hmgb1P63158 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgb1P63158 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Hmgb1P63158 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms