Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm13123-201ENSMUST00000122173 492 ntBASIC10.97□□□□□ -0.65
Sf3b6P59708 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Sf3b6P59708 AC125117.2-201ENSMUST00000228344 1140 ntBASIC10.97□□□□□ -0.65
Sf3b6P59708 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.97□□□□□ -0.65
Sf3b6P59708 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sf3b6P59708 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.97□□□□□ -0.65
Sf3b6P59708 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.97□□□□□ -0.65
Sf3b6P59708 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.97□□□□□ -0.65
Sf3b6P59708 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sf3b6P59708 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sf3b6P59708 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.96□□□□□ -0.65
Sf3b6P59708 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sf3b6P59708 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sf3b6P59708 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.96□□□□□ -0.65
Sf3b6P59708 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Gm12928-201ENSMUST00000117115 573 ntBASIC10.96□□□□□ -0.65
Sf3b6P59708 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.96□□□□□ -0.65
Sf3b6P59708 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.96□□□□□ -0.65
Sf3b6P59708 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Sf3b6P59708 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.96□□□□□ -0.65
Sf3b6P59708 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.96□□□□□ -0.65
Sf3b6P59708 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Sf3b6P59708 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sf3b6P59708 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sf3b6P59708 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sf3b6P59708 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sf3b6P59708 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sf3b6P59708 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sf3b6P59708 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sf3b6P59708 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.96□□□□□ -0.66
Sf3b6P59708 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sf3b6P59708 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sf3b6P59708 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sf3b6P59708 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Sf3b6P59708 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.96□□□□□ -0.66
Sf3b6P59708 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Sf3b6P59708 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Sf3b6P59708 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.95□□□□□ -0.66
Sf3b6P59708 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.95□□□□□ -0.66
Sf3b6P59708 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.95□□□□□ -0.66
Sf3b6P59708 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sf3b6P59708 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.95□□□□□ -0.66
Sf3b6P59708 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.95□□□□□ -0.66
Sf3b6P59708 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.95□□□□□ -0.66
Sf3b6P59708 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Sf3b6P59708 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.95□□□□□ -0.66
Sf3b6P59708 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.95□□□□□ -0.66
Sf3b6P59708 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.95□□□□□ -0.66
Sf3b6P59708 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.95□□□□□ -0.66
Sf3b6P59708 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.95□□□□□ -0.66
Sf3b6P59708 Gm27892-201ENSMUST00000185017 106 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms