Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.97□□□□□ -0.81
Sssca1P56873 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.97□□□□□ -0.81
Sssca1P56873 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.97□□□□□ -0.81
Sssca1P56873 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Sssca1P56873 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.97□□□□□ -0.81
Sssca1P56873 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.97□□□□□ -0.81
Sssca1P56873 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Sssca1P56873 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Gm10156-201ENSMUST00000122364 462 ntBASIC9.97□□□□□ -0.81
Sssca1P56873 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.97□□□□□ -0.81
Sssca1P56873 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC9.97□□□□□ -0.81
Sssca1P56873 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.97□□□□□ -0.81
Sssca1P56873 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.97□□□□□ -0.81
Sssca1P56873 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Sssca1P56873 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC9.97□□□□□ -0.81
Sssca1P56873 Proscos-202ENSMUST00000178990 666 ntBASIC9.97□□□□□ -0.81
Sssca1P56873 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Gm27701-201ENSMUST00000184498 110 ntBASIC9.97□□□□□ -0.81
Sssca1P56873 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Sssca1P56873 Gm5896-201ENSMUST00000189662 1024 ntBASIC9.97□□□□□ -0.81
Sssca1P56873 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC9.97□□□□□ -0.81
Sssca1P56873 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC9.97□□□□□ -0.81
Sssca1P56873 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Sssca1P56873 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC9.97□□□□□ -0.81
Sssca1P56873 Gm8598-201ENSMUST00000221184 836 ntBASIC9.97□□□□□ -0.81
Sssca1P56873 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.97□□□□□ -0.81
Sssca1P56873 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC9.97□□□□□ -0.81
Sssca1P56873 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 AL645783.1-201ENSMUST00000221416 1832 ntBASIC9.97□□□□□ -0.81
Sssca1P56873 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Sssca1P56873 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Sssca1P56873 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Sssca1P56873 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.97□□□□□ -0.81
Sssca1P56873 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sssca1P56873 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sssca1P56873 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sssca1P56873 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC9.96□□□□□ -0.81
Sssca1P56873 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sssca1P56873 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Sssca1P56873 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sssca1P56873 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.96□□□□□ -0.81
Sssca1P56873 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sssca1P56873 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sssca1P56873 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.96□□□□□ -0.81
Sssca1P56873 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sssca1P56873 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Sssca1P56873 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sssca1P56873 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sssca1P56873 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Sssca1P56873 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Sssca1P56873 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Sssca1P56873 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Gm7488-201ENSMUST00000117148 684 ntBASIC9.96□□□□□ -0.82
Sssca1P56873 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.96□□□□□ -0.82
Sssca1P56873 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.96□□□□□ -0.82
Sssca1P56873 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC9.96□□□□□ -0.82
Sssca1P56873 Rmrp-201ENSMUST00000157463 271 ntBASIC9.96□□□□□ -0.82
Sssca1P56873 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.96□□□□□ -0.82
Sssca1P56873 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC9.96□□□□□ -0.82
Sssca1P56873 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.96□□□□□ -0.82
Sssca1P56873 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.96□□□□□ -0.82
Sssca1P56873 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC9.96□□□□□ -0.82
Sssca1P56873 AL593843.1-201ENSMUST00000195891 145 ntBASIC9.96□□□□□ -0.82
Sssca1P56873 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC9.96□□□□□ -0.82
Sssca1P56873 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9.96□□□□□ -0.82
Sssca1P56873 Gm45668-201ENSMUST00000211271 493 ntBASIC9.96□□□□□ -0.82
Sssca1P56873 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.96□□□□□ -0.82
Sssca1P56873 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Sssca1P56873 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Sssca1P56873 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.96□□□□□ -0.82
Sssca1P56873 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.96□□□□□ -0.82
Sssca1P56873 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms