Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.42□□□□□ -0.42
SmoP56726 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.42□□□□□ -0.42
SmoP56726 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SmoP56726 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.41□□□□□ -0.42
SmoP56726 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.41□□□□□ -0.42
SmoP56726 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.41□□□□□ -0.42
SmoP56726 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Rprl1-201ENSMUST00000158050 327 ntBASIC12.41□□□□□ -0.42
SmoP56726 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.41□□□□□ -0.42
SmoP56726 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.41□□□□□ -0.42
SmoP56726 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Gm18212-201ENSMUST00000211678 889 ntBASIC12.41□□□□□ -0.42
SmoP56726 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.41□□□□□ -0.42
SmoP56726 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SmoP56726 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SmoP56726 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.41□□□□□ -0.42
SmoP56726 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.41□□□□□ -0.42
SmoP56726 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SmoP56726 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.41□□□□□ -0.42
SmoP56726 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SmoP56726 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SmoP56726 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.4□□□□□ -0.42
SmoP56726 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.4□□□□□ -0.42
SmoP56726 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SmoP56726 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SmoP56726 Gm14208-201ENSMUST00000119645 678 ntBASIC12.4□□□□□ -0.42
SmoP56726 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.4□□□□□ -0.42
SmoP56726 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.4□□□□□ -0.42
SmoP56726 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Gm24990-201ENSMUST00000157406 323 ntBASIC12.4□□□□□ -0.42
SmoP56726 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.4□□□□□ -0.42
SmoP56726 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SmoP56726 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.4□□□□□ -0.42
SmoP56726 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.4□□□□□ -0.42
SmoP56726 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SmoP56726 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SmoP56726 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
SmoP56726 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
SmoP56726 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.39□□□□□ -0.43
SmoP56726 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.39□□□□□ -0.43
SmoP56726 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SmoP56726 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
SmoP56726 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SmoP56726 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SmoP56726 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SmoP56726 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.39□□□□□ -0.43
SmoP56726 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms