Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lim2P56563 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Lim2P56563 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.35□□□□□ -0.43
Lim2P56563 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lim2P56563 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Lim2P56563 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lim2P56563 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lim2P56563 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lim2P56563 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.34□□□□□ -0.43
Lim2P56563 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lim2P56563 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.34□□□□□ -0.43
Lim2P56563 Gm18304-201ENSMUST00000189162 546 ntBASIC12.34□□□□□ -0.43
Lim2P56563 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.34□□□□□ -0.43
Lim2P56563 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.34□□□□□ -0.43
Lim2P56563 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.34□□□□□ -0.43
Lim2P56563 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.34□□□□□ -0.43
Lim2P56563 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.34□□□□□ -0.43
Lim2P56563 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.34□□□□□ -0.43
Lim2P56563 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Lim2P56563 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lim2P56563 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.34□□□□□ -0.43
Lim2P56563 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.33□□□□□ -0.43
Lim2P56563 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Lim2P56563 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Lim2P56563 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
Lim2P56563 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.33□□□□□ -0.43
Lim2P56563 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lim2P56563 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lim2P56563 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lim2P56563 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lim2P56563 Gm15547-201ENSMUST00000122152 333 ntBASIC12.33□□□□□ -0.44
Lim2P56563 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lim2P56563 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.33□□□□□ -0.44
Lim2P56563 Gm27390-201ENSMUST00000184516 176 ntBASIC12.33□□□□□ -0.44
Lim2P56563 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lim2P56563 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lim2P56563 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.33□□□□□ -0.44
Lim2P56563 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lim2P56563 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lim2P56563 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lim2P56563 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lim2P56563 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lim2P56563 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lim2P56563 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Lim2P56563 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lim2P56563 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lim2P56563 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lim2P56563 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lim2P56563 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.32□□□□□ -0.44
Lim2P56563 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.32□□□□□ -0.44
Lim2P56563 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.32□□□□□ -0.44
Lim2P56563 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lim2P56563 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lim2P56563 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lim2P56563 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lim2P56563 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lim2P56563 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lim2P56563 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lim2P56563 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.32□□□□□ -0.44
Lim2P56563 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lim2P56563 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lim2P56563 Gm28882-201ENSMUST00000185504 314 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms