Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RoraP51448 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
RoraP51448 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.73□□□□□ -0.53
RoraP51448 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RoraP51448 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
RoraP51448 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RoraP51448 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RoraP51448 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RoraP51448 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.73□□□□□ -0.53
RoraP51448 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RoraP51448 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.73□□□□□ -0.53
RoraP51448 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Gm25700-201ENSMUST00000177693 110 ntBASIC11.73□□□□□ -0.53
RoraP51448 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.73□□□□□ -0.53
RoraP51448 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.73□□□□□ -0.53
RoraP51448 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.73□□□□□ -0.53
RoraP51448 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.73□□□□□ -0.53
RoraP51448 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
RoraP51448 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RoraP51448 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.73□□□□□ -0.53
RoraP51448 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.72□□□□□ -0.53
RoraP51448 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
RoraP51448 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.72□□□□□ -0.53
RoraP51448 Gm12015-201ENSMUST00000117065 843 ntBASIC11.72□□□□□ -0.53
RoraP51448 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.72□□□□□ -0.53
RoraP51448 Rmrp-201ENSMUST00000157463 271 ntBASIC11.72□□□□□ -0.53
RoraP51448 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.72□□□□□ -0.53
RoraP51448 Gm27341-201ENSMUST00000183570 106 ntBASIC11.72□□□□□ -0.53
RoraP51448 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.72□□□□□ -0.53
RoraP51448 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.72□□□□□ -0.53
RoraP51448 Rps4l-202ENSMUST00000204242 789 ntBASIC11.72□□□□□ -0.53
RoraP51448 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.72□□□□□ -0.53
RoraP51448 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
RoraP51448 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.72□□□□□ -0.53
RoraP51448 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.72□□□□□ -0.53
RoraP51448 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RoraP51448 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.72□□□□□ -0.53
RoraP51448 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.72□□□□□ -0.53
RoraP51448 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.72□□□□□ -0.53
RoraP51448 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
RoraP51448 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RoraP51448 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms