Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.06□□□□□ -0.32
Shmt1P50431 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Shmt1P50431 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Shmt1P50431 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.05□□□□□ -0.32
Shmt1P50431 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Shmt1P50431 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Shmt1P50431 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Shmt1P50431 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Gm13665-201ENSMUST00000120830 528 ntBASIC13.05□□□□□ -0.32
Shmt1P50431 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.05□□□□□ -0.32
Shmt1P50431 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.05□□□□□ -0.32
Shmt1P50431 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Shmt1P50431 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Shmt1P50431 Gm44262-201ENSMUST00000204969 372 ntBASIC13.05□□□□□ -0.32
Shmt1P50431 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.05□□□□□ -0.32
Shmt1P50431 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.05□□□□□ -0.32
Shmt1P50431 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.05□□□□□ -0.32
Shmt1P50431 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.05□□□□□ -0.32
Shmt1P50431 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.05□□□□□ -0.32
Shmt1P50431 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Shmt1P50431 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Shmt1P50431 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shmt1P50431 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Shmt1P50431 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Shmt1P50431 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.04□□□□□ -0.32
Shmt1P50431 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.04□□□□□ -0.32
Shmt1P50431 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Shmt1P50431 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Shmt1P50431 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.04□□□□□ -0.32
Shmt1P50431 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.04□□□□□ -0.32
Shmt1P50431 Gm14017-201ENSMUST00000121934 386 ntBASIC13.04□□□□□ -0.32
Shmt1P50431 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Gm24990-201ENSMUST00000157406 323 ntBASIC13.04□□□□□ -0.32
Shmt1P50431 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.04□□□□□ -0.32
Shmt1P50431 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.04□□□□□ -0.32
Shmt1P50431 Rprl1-202ENSMUST00000198476 238 ntBASIC13.04□□□□□ -0.32
Shmt1P50431 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.04□□□□□ -0.32
Shmt1P50431 Gm44651-201ENSMUST00000207343 372 ntBASIC13.04□□□□□ -0.32
Shmt1P50431 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Shmt1P50431 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Shmt1P50431 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.04□□□□□ -0.32
Shmt1P50431 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Shmt1P50431 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shmt1P50431 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shmt1P50431 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.03□□□□□ -0.32
Shmt1P50431 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shmt1P50431 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms