Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Nkx2-1P50220 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Gm12859-201ENSMUST00000117834 427 ntBASIC10.23□□□□□ -0.77
Nkx2-1P50220 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.23□□□□□ -0.77
Nkx2-1P50220 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.23□□□□□ -0.77
Nkx2-1P50220 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Gm15823-201ENSMUST00000064305 670 ntBASIC10.23□□□□□ -0.77
Nkx2-1P50220 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.23□□□□□ -0.77
Nkx2-1P50220 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nkx2-1P50220 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.22□□□□□ -0.77
Nkx2-1P50220 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Mir6392-201ENSMUST00000184924 108 ntBASIC10.22□□□□□ -0.77
Nkx2-1P50220 Mir7654-201ENSMUST00000185082 70 ntBASIC10.22□□□□□ -0.77
Nkx2-1P50220 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.22□□□□□ -0.77
Nkx2-1P50220 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.22□□□□□ -0.77
Nkx2-1P50220 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Gm18624-201ENSMUST00000220966 658 ntBASIC10.22□□□□□ -0.77
Nkx2-1P50220 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx2-1P50220 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms