Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
GdnfP48540 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.87□□□□□ -0.67
GdnfP48540 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
GdnfP48540 Gm10012-201ENSMUST00000078252 192 ntBASIC10.87□□□□□ -0.67
GdnfP48540 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.87□□□□□ -0.67
GdnfP48540 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
GdnfP48540 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
GdnfP48540 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
GdnfP48540 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
GdnfP48540 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.86□□□□□ -0.67
GdnfP48540 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.86□□□□□ -0.67
GdnfP48540 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.86□□□□□ -0.67
GdnfP48540 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
GdnfP48540 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.86□□□□□ -0.67
GdnfP48540 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
GdnfP48540 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Gm13899-201ENSMUST00000121519 1255 ntBASIC10.86□□□□□ -0.67
GdnfP48540 Gm10156-201ENSMUST00000122364 462 ntBASIC10.86□□□□□ -0.67
GdnfP48540 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
GdnfP48540 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.86□□□□□ -0.67
GdnfP48540 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.86□□□□□ -0.67
GdnfP48540 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.86□□□□□ -0.67
GdnfP48540 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.86□□□□□ -0.67
GdnfP48540 Gm35960-201ENSMUST00000202712 767 ntBASIC10.86□□□□□ -0.67
GdnfP48540 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.86□□□□□ -0.67
GdnfP48540 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.86□□□□□ -0.67
GdnfP48540 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
GdnfP48540 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.86□□□□□ -0.67
GdnfP48540 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.86□□□□□ -0.67
GdnfP48540 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
GdnfP48540 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
GdnfP48540 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.86□□□□□ -0.67
GdnfP48540 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
GdnfP48540 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.85□□□□□ -0.67
GdnfP48540 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.85□□□□□ -0.67
GdnfP48540 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
GdnfP48540 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.85□□□□□ -0.67
GdnfP48540 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
GdnfP48540 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
GdnfP48540 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
GdnfP48540 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms