Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rfx3P48381 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.17□□□□□ -0.62
Rfx3P48381 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rfx3P48381 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.17□□□□□ -0.62
Rfx3P48381 Gm12363-201ENSMUST00000122250 668 ntBASIC11.17□□□□□ -0.62
Rfx3P48381 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.17□□□□□ -0.62
Rfx3P48381 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rfx3P48381 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.17□□□□□ -0.62
Rfx3P48381 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.17□□□□□ -0.62
Rfx3P48381 Gm43818-201ENSMUST00000200605 466 ntBASIC11.17□□□□□ -0.62
Rfx3P48381 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rfx3P48381 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.17□□□□□ -0.62
Rfx3P48381 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rfx3P48381 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.16□□□□□ -0.62
Rfx3P48381 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.16□□□□□ -0.62
Rfx3P48381 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rfx3P48381 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
Rfx3P48381 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Rfx3P48381 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
Rfx3P48381 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rfx3P48381 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Snord83b-201ENSMUST00000104546 94 ntBASIC11.16□□□□□ -0.62
Rfx3P48381 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Rfx3P48381 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Rfx3P48381 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rfx3P48381 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.16□□□□□ -0.62
Rfx3P48381 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.16□□□□□ -0.62
Rfx3P48381 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.16□□□□□ -0.62
Rfx3P48381 Gm6266-201ENSMUST00000203844 806 ntBASIC11.16□□□□□ -0.62
Rfx3P48381 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Rfx3P48381 Gm10268-201ENSMUST00000085340 555 ntBASIC11.16□□□□□ -0.62
Rfx3P48381 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Rfx3P48381 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.16□□□□□ -0.62
Rfx3P48381 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Rfx3P48381 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rfx3P48381 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rfx3P48381 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Rfx3P48381 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Rfx3P48381 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rfx3P48381 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms