Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Sox6P40645 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Sox6P40645 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.63□□□□□ -0.55
Sox6P40645 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Sox6P40645 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.63□□□□□ -0.55
Sox6P40645 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Sox6P40645 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Sox6P40645 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sox6P40645 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Sox6P40645 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.62□□□□□ -0.55
Sox6P40645 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.62□□□□□ -0.55
Sox6P40645 Gm16479-201ENSMUST00000121706 932 ntBASIC11.62□□□□□ -0.55
Sox6P40645 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.62□□□□□ -0.55
Sox6P40645 Gm29127-201ENSMUST00000188304 517 ntBASIC11.62□□□□□ -0.55
Sox6P40645 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.62□□□□□ -0.55
Sox6P40645 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.62□□□□□ -0.55
Sox6P40645 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.62□□□□□ -0.55
Sox6P40645 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sox6P40645 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.62□□□□□ -0.55
Sox6P40645 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox6P40645 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.62□□□□□ -0.55
Sox6P40645 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.62□□□□□ -0.55
Sox6P40645 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
Sox6P40645 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox6P40645 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.61□□□□□ -0.55
Sox6P40645 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sox6P40645 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.61□□□□□ -0.55
Sox6P40645 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.61□□□□□ -0.55
Sox6P40645 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.61□□□□□ -0.55
Sox6P40645 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.61□□□□□ -0.55
Sox6P40645 Gm19184-201ENSMUST00000196798 928 ntBASIC11.61□□□□□ -0.55
Sox6P40645 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Gm40466-201ENSMUST00000212174 422 ntBASIC11.61□□□□□ -0.55
Sox6P40645 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.61□□□□□ -0.55
Sox6P40645 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sox6P40645 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sox6P40645 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.61□□□□□ -0.55
Sox6P40645 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Sox6P40645 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sox6P40645 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sox6P40645 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox6P40645 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sox6P40645 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms