Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.17□□□□□ -0.78
Timp3P39876 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Timp3P39876 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.17□□□□□ -0.78
Timp3P39876 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Timp3P39876 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Timp3P39876 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Timp3P39876 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Timp3P39876 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Timp3P39876 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.16□□□□□ -0.78
Timp3P39876 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Timp3P39876 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Timp3P39876 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Gm12058-201ENSMUST00000118614 437 ntBASIC10.16□□□□□ -0.78
Timp3P39876 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.16□□□□□ -0.78
Timp3P39876 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.16□□□□□ -0.78
Timp3P39876 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.16□□□□□ -0.78
Timp3P39876 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Gm17376-201ENSMUST00000166016 84 ntBASIC10.16□□□□□ -0.78
Timp3P39876 Gm2546-201ENSMUST00000182630 991 ntBASIC10.16□□□□□ -0.78
Timp3P39876 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.16□□□□□ -0.78
Timp3P39876 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Timp3P39876 Gm38092-201ENSMUST00000195600 653 ntBASIC10.16□□□□□ -0.78
Timp3P39876 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.16□□□□□ -0.78
Timp3P39876 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.16□□□□□ -0.78
Timp3P39876 Gm13097-201ENSMUST00000210722 397 ntBASIC10.16□□□□□ -0.78
Timp3P39876 Gm45925-201ENSMUST00000218882 744 ntBASIC10.16□□□□□ -0.78
Timp3P39876 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.16□□□□□ -0.78
Timp3P39876 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Timp3P39876 Mir433-201ENSMUST00000093564 124 ntBASIC10.16□□□□□ -0.78
Timp3P39876 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.16□□□□□ -0.78
Timp3P39876 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Timp3P39876 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Timp3P39876 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.16□□□□□ -0.78
Timp3P39876 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.16□□□□□ -0.78
Timp3P39876 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Timp3P39876 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.16□□□□□ -0.78
Timp3P39876 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Daam2-202ENSMUST00000224595 1926 ntBASIC10.15□□□□□ -0.78
Timp3P39876 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.15□□□□□ -0.78
Timp3P39876 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.15□□□□□ -0.78
Timp3P39876 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.15□□□□□ -0.78
Timp3P39876 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Timp3P39876 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Timp3P39876 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.15□□□□□ -0.78
Timp3P39876 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Timp3P39876 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Timp3P39876 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Timp3P39876 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms