Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sftpa1P35242 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sftpa1P35242 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Sftpa1P35242 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sftpa1P35242 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.4□□□□□ -0.58
Sftpa1P35242 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm13809-201ENSMUST00000117921 597 ntBASIC11.4□□□□□ -0.58
Sftpa1P35242 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm4726-201ENSMUST00000135604 736 ntBASIC11.4□□□□□ -0.58
Sftpa1P35242 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm6019-201ENSMUST00000148369 736 ntBASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm23085-201ENSMUST00000157849 293 ntBASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm23153-201ENSMUST00000175323 313 ntBASIC11.4□□□□□ -0.58
Sftpa1P35242 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.4□□□□□ -0.58
Sftpa1P35242 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm8100-201ENSMUST00000182906 988 ntBASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.4□□□□□ -0.58
Sftpa1P35242 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.4□□□□□ -0.58
Sftpa1P35242 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.4□□□□□ -0.58
Sftpa1P35242 Gm10288-201ENSMUST00000084614 537 ntBASIC11.4□□□□□ -0.58
Sftpa1P35242 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sftpa1P35242 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sftpa1P35242 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Sftpa1P35242 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sftpa1P35242 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Sftpa1P35242 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Sftpa1P35242 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sftpa1P35242 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Sftpa1P35242 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.39□□□□□ -0.59
Sftpa1P35242 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Sftpa1P35242 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sftpa1P35242 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sftpa1P35242 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.39□□□□□ -0.59
Sftpa1P35242 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.39□□□□□ -0.59
Sftpa1P35242 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.39□□□□□ -0.59
Sftpa1P35242 Gm11956-201ENSMUST00000119525 512 ntBASIC11.39□□□□□ -0.59
Sftpa1P35242 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.39□□□□□ -0.59
Sftpa1P35242 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.39□□□□□ -0.59
Sftpa1P35242 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.39□□□□□ -0.59
Sftpa1P35242 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sftpa1P35242 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
Sftpa1P35242 Gm37028-201ENSMUST00000194276 107 ntBASIC11.39□□□□□ -0.59
Sftpa1P35242 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.39□□□□□ -0.59
Sftpa1P35242 Gm2517-201ENSMUST00000215651 348 ntBASIC11.39□□□□□ -0.59
Sftpa1P35242 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.39□□□□□ -0.59
Sftpa1P35242 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.39□□□□□ -0.59
Sftpa1P35242 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sftpa1P35242 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sftpa1P35242 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms