Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Slc6a1P31648 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.65□□□□□ -0.7
Slc6a1P31648 Gm38144-201ENSMUST00000192790 465 ntBASIC10.65□□□□□ -0.7
Slc6a1P31648 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.65□□□□□ -0.7
Slc6a1P31648 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.65□□□□□ -0.7
Slc6a1P31648 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Slc6a1P31648 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.65□□□□□ -0.7
Slc6a1P31648 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Slc6a1P31648 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.65□□□□□ -0.7
Slc6a1P31648 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Slc6a1P31648 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Slc6a1P31648 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Slc6a1P31648 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Slc6a1P31648 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Slc6a1P31648 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Slc6a1P31648 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Slc6a1P31648 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Slc6a1P31648 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Slc6a1P31648 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Slc6a1P31648 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Slc6a1P31648 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Slc6a1P31648 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Slc6a1P31648 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Slc6a1P31648 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.64□□□□□ -0.71
Slc6a1P31648 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Slc6a1P31648 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.64□□□□□ -0.71
Slc6a1P31648 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.64□□□□□ -0.71
Slc6a1P31648 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.64□□□□□ -0.71
Slc6a1P31648 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Slc6a1P31648 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Slc6a1P31648 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.64□□□□□ -0.71
Slc6a1P31648 Gm15371-201ENSMUST00000117057 784 ntBASIC10.64□□□□□ -0.71
Slc6a1P31648 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.64□□□□□ -0.71
Slc6a1P31648 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.64□□□□□ -0.71
Slc6a1P31648 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.64□□□□□ -0.71
Slc6a1P31648 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.64□□□□□ -0.71
Slc6a1P31648 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.64□□□□□ -0.71
Slc6a1P31648 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.64□□□□□ -0.71
Slc6a1P31648 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.64□□□□□ -0.71
Slc6a1P31648 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.64□□□□□ -0.71
Slc6a1P31648 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.64□□□□□ -0.71
Slc6a1P31648 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Slc6a1P31648 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Slc6a1P31648 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.63□□□□□ -0.71
Slc6a1P31648 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Slc6a1P31648 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms