Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.86□□□□□ -0.67
Cd28P31041 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Cd28P31041 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cd28P31041 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cd28P31041 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cd28P31041 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cd28P31041 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cd28P31041 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.86□□□□□ -0.67
Cd28P31041 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Cd28P31041 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cd28P31041 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.86□□□□□ -0.67
Cd28P31041 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.86□□□□□ -0.67
Cd28P31041 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.86□□□□□ -0.67
Cd28P31041 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cd28P31041 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
Cd28P31041 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cd28P31041 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cd28P31041 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cd28P31041 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.85□□□□□ -0.67
Cd28P31041 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.85□□□□□ -0.67
Cd28P31041 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cd28P31041 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Cd28P31041 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.85□□□□□ -0.67
Cd28P31041 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.85□□□□□ -0.67
Cd28P31041 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Cd28P31041 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.85□□□□□ -0.67
Cd28P31041 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.85□□□□□ -0.67
Cd28P31041 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.85□□□□□ -0.67
Cd28P31041 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.85□□□□□ -0.67
Cd28P31041 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.85□□□□□ -0.67
Cd28P31041 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd28P31041 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Cd28P31041 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd28P31041 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd28P31041 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd28P31041 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd28P31041 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.84□□□□□ -0.67
Cd28P31041 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd28P31041 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd28P31041 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.84□□□□□ -0.67
Cd28P31041 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.84□□□□□ -0.67
Cd28P31041 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd28P31041 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd28P31041 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Cd28P31041 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd28P31041 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cd28P31041 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd28P31041 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd28P31041 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cd28P31041 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Cd28P31041 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd28P31041 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms