Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Lire1P11260 Gm26927-201ENSMUST00000182385 965 ntBASIC11.81□□□□□ -0.52
Lire1P11260 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Lire1P11260 Gm45880-201ENSMUST00000213041 853 ntBASIC11.81□□□□□ -0.52
Lire1P11260 Gm18164-201ENSMUST00000213769 927 ntBASIC11.81□□□□□ -0.52
Lire1P11260 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.81□□□□□ -0.52
Lire1P11260 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.81□□□□□ -0.52
Lire1P11260 Gm18166-201ENSMUST00000215557 927 ntBASIC11.81□□□□□ -0.52
Lire1P11260 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.81□□□□□ -0.52
Lire1P11260 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.81□□□□□ -0.52
Lire1P11260 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.81□□□□□ -0.52
Lire1P11260 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Lire1P11260 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lire1P11260 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.81□□□□□ -0.52
Lire1P11260 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lire1P11260 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.8□□□□□ -0.52
Lire1P11260 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Lire1P11260 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.8□□□□□ -0.52
Lire1P11260 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Btrc-209ENSMUST00000224478 2194 ntBASIC11.8□□□□□ -0.52
Lire1P11260 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.8□□□□□ -0.52
Lire1P11260 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.8□□□□□ -0.52
Lire1P11260 Gm1335-201ENSMUST00000121653 386 ntBASIC11.8□□□□□ -0.52
Lire1P11260 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.8□□□□□ -0.52
Lire1P11260 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.8□□□□□ -0.52
Lire1P11260 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.8□□□□□ -0.52
Lire1P11260 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.8□□□□□ -0.52
Lire1P11260 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Gm38002-201ENSMUST00000193255 180 ntBASIC11.8□□□□□ -0.52
Lire1P11260 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.8□□□□□ -0.52
Lire1P11260 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.8□□□□□ -0.52
Lire1P11260 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lire1P11260 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lire1P11260 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.79□□□□□ -0.52
Lire1P11260 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.79□□□□□ -0.52
Lire1P11260 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lire1P11260 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 Gm14723-201ENSMUST00000118686 215 ntBASIC11.79□□□□□ -0.52
Lire1P11260 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.79□□□□□ -0.52
Lire1P11260 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.79□□□□□ -0.52
Lire1P11260 Gm27682-201ENSMUST00000183930 110 ntBASIC11.79□□□□□ -0.52
Lire1P11260 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.79□□□□□ -0.52
Lire1P11260 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lire1P11260 Snora73a-201ENSMUST00000082453 205 ntBASIC11.79□□□□□ -0.52
Lire1P11260 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.79□□□□□ -0.52
Lire1P11260 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms