Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.89□□□□□ -0.67
Ccl3P10855 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccl3P10855 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ccl3P10855 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.88□□□□□ -0.67
Ccl3P10855 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.88□□□□□ -0.67
Ccl3P10855 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Ccl3P10855 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccl3P10855 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.88□□□□□ -0.67
Ccl3P10855 Gm8194-201ENSMUST00000159783 859 ntBASIC10.88□□□□□ -0.67
Ccl3P10855 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.88□□□□□ -0.67
Ccl3P10855 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Gm43058-201ENSMUST00000197645 625 ntBASIC10.88□□□□□ -0.67
Ccl3P10855 Gm45398-201ENSMUST00000210561 165 ntBASIC10.88□□□□□ -0.67
Ccl3P10855 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccl3P10855 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccl3P10855 Gm10752-201ENSMUST00000218348 729 ntBASIC10.88□□□□□ -0.67
Ccl3P10855 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.88□□□□□ -0.67
Ccl3P10855 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.88□□□□□ -0.67
Ccl3P10855 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.88□□□□□ -0.67
Ccl3P10855 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ccl3P10855 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.88□□□□□ -0.67
Ccl3P10855 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl3P10855 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.88□□□□□ -0.67
Ccl3P10855 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.87□□□□□ -0.67
Ccl3P10855 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.87□□□□□ -0.67
Ccl3P10855 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.87□□□□□ -0.67
Ccl3P10855 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ccl3P10855 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Ccl3P10855 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Ccl3P10855 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ccl3P10855 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccl3P10855 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccl3P10855 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ccl3P10855 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.87□□□□□ -0.67
Ccl3P10855 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ccl3P10855 Gm8956-201ENSMUST00000203939 825 ntBASIC10.87□□□□□ -0.67
Ccl3P10855 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccl3P10855 Gm7600-201ENSMUST00000209657 785 ntBASIC10.87□□□□□ -0.67
Ccl3P10855 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.87□□□□□ -0.67
Ccl3P10855 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccl3P10855 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.87□□□□□ -0.67
Ccl3P10855 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Ccl3P10855 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ccl3P10855 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccl3P10855 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Ccl3P10855 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms